Residence Tax in Japan and Other Common Taxes Explained

by BELONGING JAPAN
Tax in Japan

Understanding residence tax in Japan is essential for anyone living and working in the country. This tax, along with income tax, consumption tax, and other everyday taxes, affects how much individuals actually take home each year.

This comprehensive guide—supervised by certified financial planner Yukako Yamazaki (CFP®)—explains how residence tax in Japan works and introduces other common taxes such as income tax, consumption tax, capital gains tax, and property-related taxes.

About the Supervisor & Writer

Supervisor

Yukako Yamazaki
Financial Plannner

Certified Financial Planner® / 1st Grade Certified Skilled Professional of Financial Planning

Founder of FP Office MIRAI (est. 2022)

Yukako Yamazaki is an experienced financial planner with a background as a registered customs specialist and bank teller. With her motto “Changing the future through reviewing the household budget,” she provides personal finance consultations, writes financial articles, and supervises financial books and publications.

Table of Contents

Chapter 1: What is Consumption Tax?

Consumption tax (消費税 / shōhizei) in Japan is applied when purchasing goods or services. It’s included in the selling price, but the consumer ultimately bears the cost.

  • Standard rate: 10% (including 2.2% local consumption tax)

  • Reduced rate: 8% for food and beverages (excluding alcohol and dining out)

Example:

  • Rice (¥2,160) at 8% → ¥160 consumption tax

  • Alcohol (¥220) at 10% → ¥20 consumption tax

Transactions Not Subject to Consumption Tax (Non-taxable Transactions, Tax-exempt)

Most transactions involving the sale of goods, transportation, services, and advertising are subject to consumption tax. However, certain transactions that are deemed inappropriate for taxation due to social policy considerations are not subject to consumption tax.

The example of Non-taxable transactions are as follows: 

  • Salaries and wages
  • Donations, congratulatory money, and condolence money
  • Subsidies and grants from the national or local government
  • Insurance payouts and mutual aid payments
  • Dividends from stocks and distributions from investments
  • Compensation for damages to body or property

In addition, the example of tax-exempts transactions include as follows; 

  • Transfer or lease of land
  • Transfer of securities such as government bonds and stock certificates
  • Transfer of stamps, checks, and promissory notes
  • Transfer of gift certificates and prepaid cards
  • Issuance of registrations, licenses, permits, inspections, certifications, examinations, and official documents by the government
  • Provision of services related to foreign exchange transactions
  • Provision of social insurance medical benefits
  • Provision of nursing care insurance services
  • Provision of services through social welfare projects
  • Midwifery services
  • Cremation and burial fees
  • Certain transfers or leases of goods for persons with physical disabilities
  • School education and the transfer of textbooks
  • Lease of residential housing

Source: National Tax Agency

Chapter 2: What is Income Tax?

Income tax is a tax on an individual’s income. The amount of income is calculated by subtracting necessary expenses from the total annual income. Various deductions (basic deduction, spouse deduction, donation deduction, life insurance premium deduction, etc.) are then subtracted from the income to determine the taxable income.

Taxable Income = Income – Necessary Expenses – Income Deductions

Income tax is applied to this taxable income. The income tax system uses a progressive tax rate, meaning that the more taxable income you have, the higher the tax rate will be.

Income Tax Rate Table for Fiscal Year 2024 (Reiwa 6)

This table shows the income tax rates and corresponding deduction amounts for different ranges of taxable income for fiscal year 2024 (Reiwa 6).

Source: National Tax Agency

Taxable Income Range (JPY) Tax Rate Deduction Amount (JPY)
Up to 1,950,000
5%
none
1,950,001 – 3,300,000
10%
97,500
3,300,001 – 6,950,000
20%
427,500
6,950,001 – 9,000,000
23%
636,000
9,000,001 – 18,000,000
33%
1,536,000
18,000,001 – 40,000,000
40%
2,796,000
Over 40,000,000
45%
4,796,000

Example

For example, if the taxable income is 6,000,000 yen, the income tax is calculated as follows according to the table:

6,000,000 yen × 20% – 427,500 yen = 772,500 yen (Income Tax)

If there are tax credits such as the mortgage loan deduction or donation deduction, these are subtracted from the calculated income tax.

Differences in Taxable Income Range for Permanent Residents and Non-Permanent Residents

Foreigners living in Japan may have both domestic and foreign income.

Under the Income Tax Act, individuals who have an address in Japan or have lived in Japan for more than one year are classified as “residents,” while individuals who do not meet these criteria are classified as “non-residents.” The scope of taxable income differs for each category.

Additionally, residents are further divided into “permanent residents” and “non-permanent residents,” with distinctions made in the range of taxable income.

Classification Definition Scope of Taxable Income
Residents
Permanent residents
A person who Has an address in Japan, or Has lived in Japan continuously for more than one year.
All Income Earned Domestically and Abroad
Non-Permanent residents
Person who do not have Japanese nationality, and lived in Japan for a total of 5 years or less within the past 10 years.
Income earned in Japan, Foreign income that is paid in Japan or remitted to Japan
Non-residents
Individuals who do not meet the criteria for being classified as residents.
Subject to tax only on income earned in Japan.

So, overall, 

  • Permanent Residents: All income earned domestically and abroad is subject to income tax.
  • Non-Permanent Residents and Non-Residents: Generally, only income earned in Japan is subject to income tax. However, for non-permanent residents, foreign income received in Japan is also taxable.

Source: National Tax Agency

Methods of Paying Income Tax

The method of paying income tax varies depending on the employment status:

Employees (Withholding Tax)

  • Employees, typically earning up to 20 million yen annually, have income tax withheld by their employers from their salaries.
  • Any discrepancies are adjusted through year-end adjustments (nenmatsu chousei).

Employees Earning Over 20 Million Yen (Tax Return)

  • Employees earning over 20 million yen annually must file a tax return and pay income tax themselves.

Self-Employed Individuals and Freelancers (Tax Return)

      • Self-employed individuals and freelancers, who do not have withholding tax, calculate their annual income and income tax, filing a tax return for payment.

Individuals with Side Jobs or Additional Income

    • Individuals earning a certain amount from side jobs or other sources apart from their main income must also settle their income tax through tax returns.
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Chapter 3: What is Residence Tax in Japan?

Resident tax is a tax paid to the municipality where one resides. Individuals with certain income levels are required to pay this tax in the following fiscal year.

Resident tax includes prefectural taxes, which are paid together to the municipality.

residence tax in Japan

Breakdown of Individual Residence Tax in Japan

Resident tax consists of two components: the “per capita rate,” which is paid regardless of income level, and the “income rate,” which varies based on income.

The per capita rate varies by municipality but generally ranges from 5,000 yen to 6,000 yen annually.

The income rate is set at 10%.

Example breakdown of the per capita rate (annual 5,000 yen):

  • Municipal tax (市町村民税 / Shichōsonminzei): 3,000円
  • Prefectural tax (都道府県民税 / Todōfukenminzei): 1,000円 
  • Forest environment tax (森林環境税 / Shinrin Kankyōzei): 1,000円 from the Reiwa 6 fiscal year

Example breakdown of the income rate (standard tax rate 10%):

  • Municipal tax (市町村民税 / Shichōsonminzei): 6%
  • Prefectural tax (都道府県民税 / Todōfukenminzei): 4%

Calculation example for residence tax (taxable income 6 million yen): The total amount of the per capita rate and income rate determines the resident tax amount. Similar to income tax calculation, the standard tax rate is applied to the taxable income after various income deductions, and then the per capita rate is added.

6,000,000 yen (taxable income) × 10% – (tax deduction amount*) = 600,000 yen (income rate amount)

600,000 yen (income rate amount) + 5,000 yen (per capita rate amount) = 650,000 yen (annual resident tax)

Source: Ministry of Internal Affairs and Communications

Methods of Paying Residence Tax in Japan

Residence tax payments are handled through two methods: “normal collection” and “special collection,” depending on one’s employment status.

Self-employed individuals and freelancers use “normal collection.” Local municipalities send tax payment notifications detailing the tax amount to taxpayers. Taxpayers then pay using methods such as bank transfers, convenience stores, or mobile payments.

Employees generally use “special collection.” Companies deduct taxes directly from employees’ salaries and remit them on behalf of the employees.

Chapter 4: Other Tax in Japan

In addition to the taxes mentioned above, here are other taxes that you may encounter.

Capital gains Tax

Capital gains tax applies to profits earned from selling assets such as land, buildings, or stocks. For example, if you bought stocks for 200,000 yen and sold them for 300,000 yen, the 100,000 yen difference is subject to taxation.

For land or buildings, the capital gain is taxable after deducting acquisition costs, transfer expenses, special deduction amounts, and so on from the selling price.

The tax rate on capital gains varies depending on the type of asset sold. For instance, capital gains from stocks are taxed at 20.315%, while for land or buildings, if held for over 5 years, the tax rate is 15%, and if held for 5 years or less, it’s 30%.

When purchasing a car

  • Automobile Tax (自動車税 / Jidōsha-zei): Taxed annually based on engine displacement. Owners as of April 1st each year are obligated to pay.
  • Automobile Weight Tax (自動車重量税 / Jidōsha jūryōzei): Taxed upon initial registration and at the time of vehicle inspection, based on the vehicle’s weight.
  • Environmental Performance Levy (環境性能割 / Kankyō seinō-wari): Taxed based on fuel efficiency. Vehicles with better fuel efficiency have lower tax rates.
  • Consumption Tax (消費税 / Shōhizei): A 10% tax applied to the vehicle’s base price plus accessories.

When purchasing a house

When purchasing a house, there are two types of taxes involved: one-time taxes incurred at the time of purchase and annual taxes incurred after purchase.

Taxes incurred at the time of purchase:

  • Stamp Duty (印紙税 / Inshi-zei) 
  • Real Estate Acquisition Tax (不動産取得税 / Fudōsan Shutokuzei) 
  • Registration and License Tax (登録免許税 / Tōroku Menkyozei) 
  • Consumption Tax (消費税 / Shōhizei) 

Annual taxes incurred after purchase:

  •  Property Tax (Fixed Asset Tax) (固定資産税 / Kotei Shisanzei) 
  • City Planning Tax (都市計画税 / Toshi Keikakzei) 

Bathing Tax and Accommodation Tax

  • Bathing Tax (入湯税 / nyūtozei)

The bathing tax is a levy imposed by municipalities on bathers to support the maintenance of environmental hygiene facilities, protective management facilities, and to promote tourism. The standard tax rate is 150 yen per person per day.

  • Accommodation Tax (宿泊税 / Shukuhakuzei)

The accommodation tax is introduced to cover costs promoting regional tourism and is levied on guests staying in certain areas such as Tokyo, Osaka, and Fukuoka. Rates vary by region; for instance, in Tokyo, the tax is 100 yen per person per night for stays costing between 10,000 yen and less than 15,000 yen, and 200 yen for stays costing 15,000 yen or more. Stays costing less than 10,000 yen per person per night are exempt from taxation. (As of June 2024)

Source: Bureau of Taxation

Chapter 5: FAQ: Common Taxes in Japan

1. What is consumption tax in Japan?
Consumption tax is a tax applied when buying goods or receiving services. The standard rate is 10% (including 2.2% local tax), while food items (excluding dining out and alcohol) are taxed at a reduced rate of 8%. Businesses collect this tax from consumers and deduct any tax already paid on their purchases. Certain transactions, such as salaries, donations, and insurance payouts, are exempt or non-taxable.

2. How is income tax calculated in Japan?
Income tax is based on an individual’s annual income after deducting necessary expenses and applicable deductions (e.g., basic deduction, spouse deduction, donation deduction). Japan uses a progressive tax rate, so higher taxable income results in higher tax. Taxable income is calculated as:
Taxable Income = Income – Necessary Expenses – Income Deductions

3. What is residence tax in Japan, and who pays it?
Residence tax is a local tax paid to the municipality where you live. It has two components:

  • Per capita rate: fixed amount (around 5,000–6,000 yen annually)

  • Income rate: 10% of taxable income
    Anyone living in Japan with taxable income, including foreign residents, must pay residence tax.

4. How can I pay residence tax in Japan?
Payment depends on employment status:

  • Special collection: Employers deduct tax directly from salaries.

  • Normal collection: Self-employed individuals or freelancers pay directly via bank transfer, convenience stores, or mobile payment.

5. What other taxes should individuals in Japan be aware of?
Other common taxes include:

  • Capital gains tax: Applies to profits from selling stocks, land, or buildings. Rates vary by asset type and holding period.

  • Automobile taxes: Annual vehicle tax, weight tax, environmental performance levy, and consumption tax on car purchases.

  • Property-related taxes: Paid when purchasing or owning real estate, including stamp duty, real estate acquisition tax, and annual fixed asset tax.

This article is intended for general informational purposes only and does not constitute personalized financial, tax, or legal advice. Although the content has been reviewed and supervised by a certified financial planner, readers should consult their own qualified financial or tax advisor before making any decisions. Belonging JAPAN is independent and is not affiliated with, endorsed by, or responsible for any financial institutions or products mentioned in this article.

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